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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.4TPM
GTEx:33.6RPKM
FANTOM5:35.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not available
 

Antibody staining

Antibody HPA042550

  

Antibody HPA059859

  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Adipocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA042550

  

Antibody HPA059859

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

10.4
N/A Female, age 80 Sample 1
TPM: 27.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 9.7
N/A Female, age 57 Sample 3
TPM: 8.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 4.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 2.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

33.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 45.9
Samples: 350

Max RPKM: 190.9
Min RPKM: 6.2
Std RPKM: 26.9
Median RPKM: 42.1
GTEX-UJHI-1626-SM-3DB9A 50-59 years, female 190.9
GTEX-13OVI-1326-SM-5IJBO 60-69 years, female 159.4
GTEX-14BMV-0226-SM-5S2N2 50-59 years, male 152.6
GTEX-WVJS-0226-SM-4MVOU 50-59 years, male 139.1
GTEX-ZDTS-0226-SM-5HL7Q 60-69 years, male 135.4
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 126.1
GTEX-ZXG5-0226-SM-59HJI 60-69 years, male 121.8
GTEX-Y5V5-2426-SM-5IFJA 60-69 years, female 118.9
GTEX-11TTK-0226-SM-5N9EC 60-69 years, female 115.1
GTEX-X15G-2326-SM-4PQZS 50-59 years, female 113.4
Show all
Adipose - Visceral (Omentum)
RPKM: 14.5
Samples: 227

Max RPKM: 51.6
Min RPKM: 0.3
Std RPKM: 10.7
Median RPKM: 11.0
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 51.6
GTEX-WHWD-0826-SM-3LK6R 50-59 years, male 50.3
GTEX-145ME-0726-SM-5O9A3 40-49 years, female 48.4
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 47.6
GTEX-13G51-0526-SM-5IJCQ 60-69 years, male 46.8
GTEX-ZPU1-1226-SM-5HL71 40-49 years, male 41.3
GTEX-11NUK-2026-SM-5PNVZ 50-59 years, male 40.6
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 39.9
GTEX-Y8E4-1226-SM-5IFIM 40-49 years, male 39.5
GTEX-XBEC-1826-SM-4QASN 50-59 years, male 38.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

35.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 35.8
FF:10010-101C1 65,65,76 years, mixed 35.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.