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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:32.1TPM
GTEx:6.1RPKM
FANTOM5:17.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA001031

  

Antibody CAB000469

  

Antibody CAB047315

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA001031

  

Antibody CAB000469

  

Antibody CAB047315

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

32.1
N/A Female, age 80 Sample 1
TPM: 27.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 49.5
N/A Female, age 57 Sample 3
TPM: 43.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 20
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 19.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.9
Samples: 350

Max RPKM: 28.0
Min RPKM: 1.0
Std RPKM: 3.7
Median RPKM: 6.2
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 28.0
GTEX-XV7Q-2626-SM-4BRVA 40-49 years, female 23.0
GTEX-W5WG-2526-SM-4SOJ2 50-59 years, female 22.9
GTEX-12126-0426-SM-5Q5AP 20-29 years, male 20.6
GTEX-XPVG-2726-SM-4B66W 50-59 years, male 18.7
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 18.4
GTEX-145MN-2626-SM-5NQAH 30-39 years, male 17.2
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 16.4
GTEX-ZPCL-2126-SM-57WFZ 60-69 years, female 16.2
GTEX-ZUA1-0226-SM-5NQ9Q 40-49 years, male 15.4
Show all
Adipose - Visceral (Omentum)
RPKM: 4.9
Samples: 227

Max RPKM: 15.9
Min RPKM: 0.8
Std RPKM: 2.6
Median RPKM: 4.5
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 15.9
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 13.9
GTEX-ZVT2-0226-SM-5GIE3 50-59 years, female 13.0
GTEX-ZYFG-1426-SM-5GICS 60-69 years, female 12.3
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 11.7
GTEX-14B4R-0526-SM-5QGQT 30-39 years, male 11.5
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 11.3
GTEX-ZDYS-2226-SM-5S2MI 50-59 years, male 10.9
GTEX-13FTX-0626-SM-5J2NS 20-29 years, female 10.4
GTEX-Y3I4-0726-SM-4TT7M 50-59 years, male 10.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

17.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 17.3
FF:10010-101C1 65,65,76 years, mixed 17.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.