Tissue expression of CSTA - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	3.7	TPM
GTEx:	0.9	RPKM
FANTOM5:	3.6	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	Not detected
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA001031	Antibody CAB000469	Antibody CAB047315
Endothelial cells	Not detected	Not detected	Not detected
Glandular cells	Not detected	Not detected	Not detected
Peripheral nerve/ganglion	Not detected	Not detected	Not detected

COLON - HPA RNA-seq

Average TPM	3.7

Male, age 54

Sample 1
TPM: 3

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 3.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 2.2

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 9.4

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 4.6

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 5.4

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 2

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 4.6

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 3.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 3

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 3.1

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 3.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	0.9

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 0.6

Samples: 149

Max RPKM: 2.3
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.5

GTEX-ZAB4-2426-SM-5HL8A

40-49 years, male

2.3

GTEX-11TT1-0926-SM-5GU5M

20-29 years, male

2.1

GTEX-13X6I-2726-SM-5Q5ET

60-69 years, male

2.0

GTEX-ZV6S-1126-SM-57WE9

40-49 years, female

2.0

GTEX-WI4N-2226-SM-4OOS9

40-49 years, female

1.8

GTEX-12ZZW-2426-SM-5DUWE

50-59 years, male

1.4

GTEX-WFG8-1726-SM-4LVM6

20-29 years, male

1.4

GTEX-1122O-1426-SM-5H11R

60-69 years, female

1.3

GTEX-13OVJ-1826-SM-5KM2D

50-59 years, female

1.3

GTEX-ZYY3-2226-SM-5E45A

60-69 years, female

1.3

Show all

Colon - Transverse
RPKM: 1.0

Samples: 196

Max RPKM: 5.6
Min RPKM: 0.0
Std RPKM: 0.7
Median RPKM: 0.8

GTEX-13W3W-2126-SM-5K7UX

60-69 years, female

5.6

GTEX-14C38-2626-SM-5RQI4

50-59 years, male

5.5

GTEX-XQ8I-2126-SM-4BOOM

50-59 years, male

5.1

GTEX-U3ZN-2126-SM-4DXU1

30-39 years, female

3.4

GTEX-Q2AH-1226-SM-48TZL

40-49 years, male

3.3

GTEX-12WSJ-1526-SM-5GCNI

40-49 years, female

3.1

GTEX-1339X-1626-SM-5IJDN

40-49 years, male

2.4

GTEX-13OVG-1426-SM-5K7VP

60-69 years, male

2.4

GTEX-Y3IK-1826-SM-4WWDS

50-59 years, female

2.4

GTEX-ZXES-1626-SM-5NQ7L

30-39 years, female

2.4

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	3.6

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 3.6

FF:10014-101C5

62,83,84 years, mixed

3.6