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RIOK1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.5TPM
GTEx:9.0RPKM
FANTOM5:13.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA017866

  

Antibody HPA051446

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

6.5
overview Male, age 54 Sample 1
TPM: 6.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.6
Samples: 149

Max RPKM: 21.0
Min RPKM: 6.0
Std RPKM: 2.3
Median RPKM: 9.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 21.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 17.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 16.9
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 16.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.5
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 15.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 15.1
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 14.9
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 14.7
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 14.4
Show all
Colon - Transverse
RPKM: 8.5
Samples: 196

Max RPKM: 20.0
Min RPKM: 4.6
Std RPKM: 2.1
Median RPKM: 8.2
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 20.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 14.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 14.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 14.4
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 14.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 13.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 13.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 13.3
GTEX-144GM-1226-SM-5LU52 20-29 years, male 13.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 13.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.6
FF:10014-101C5 62,83,84 years, mixed 13.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.