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Field

Term
Gene name

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External id

In atlas

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Reliability

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Validation

Method

Validation

Method

Validation

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Detectable

Cell line

Detectable

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Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA ENDOMETRIUM

GENE/PROTEIN

Antibody validation


Dictionary

Endometrium

Tissue proteome

Endometrium

ENDOMETRIUM - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.2TPM
GTEx:25.8RPKM
FANTOM5:221.4Tags Per Million

ENDOMETRIUM 1 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Cells in endometrial stroma

Not detected   Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   Not detected   Medium   Medium   Medium   Medium  
           
           
           

ENDOMETRIUM 2 - Annotated protein expression

Annotated protein
expression

Cells in endometrial stroma:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Cells in endometrial stroma

Low   Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

High   Not detected   Not detected   Medium   Medium   High  
           
           
           

ENDOMETRIUM - HPA RNA-seq

Average TPM

15.2

overview Female, age 34 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 5
Stromal cells: 25
Smooth muscle cells: 65
Other cell types: 5
overview Female, age 56 Sample 2
TPM: 14
Cell types%
Glandular cells: 5
Stromal cells: 15
Smooth muscle cells: 75
Other cell types: 5
overview Female, age 40 Sample 3
TPM: 17
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 70
Other cell types: 5
overview Female, age 60 Sample 4
TPM: 15
Cell types%
Glandular cells: 5
Stromal cells: 20
Smooth muscle cells: 75
Other cell types: 0
overview Female, age 83 Sample 5
TPM: 16.6
Cell types%
Glandular cells: 5
Stromal cells: 10
Smooth muscle cells: 80
Other cell types: 5

ENDOMETRIUM - GTEx RNA-seq

Average RPKM

25.8

GTEx sample id

Sample description

RPKM

Uterus - Endometrium
RPKM: 25.8
Samples: 14

Max RPKM: 46.2
Min RPKM: 12.4
Std RPKM: 8.5
Median RPKM: 24.4
GTEX-PWN1-2026-SM-48TD9 40-49 years, female 46.2
GTEX-ZVT2-0426-SM-5E44S 50-59 years, female 37.4
GTEX-PX3G-2026-SM-48U1H 20-29 years, female 32.4
GTEX-R55G-1626-SM-48FF4 40-49 years, female 29.7
GTEX-11EM3-1926-SM-5987U 20-29 years, female 29.5
GTEX-P78B-2526-SM-3P5ZY 40-49 years, female 26.5
GTEX-U3ZN-0726-SM-4DXT5 30-39 years, female 25.2
GTEX-XUZC-0926-SM-4BOQF 30-39 years, female 23.6
GTEX-T5JW-1526-SM-4DM5E 20-29 years, female 22.3
GTEX-S32W-1426-SM-4AD66 50-59 years, female 21.6
GTEX-T6MO-1526-SM-4DM57 40-49 years, female 19.5
GTEX-13QBU-1626-SM-5LU4S 40-49 years, female 18.3
GTEX-ZTPG-2026-SM-5O999 20-29 years, female 16.8
GTEX-Y114-1826-SM-4TT87 50-59 years, female 12.4
Show all

ENDOMETRIUM - FANTOM5 CAGE

Average Tags Per Million

221.4

FANTOM5 sample id

Sample description

Tags Per Million

Uterus
Tags Per Million: 221.4
FF:10100-102D1 23-63 years, female 221.4

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