Tissue expression of ACLY - Staining in breast - The Human Protein Atlas

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ACLY

TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation

Dictionary
	Breast

BREAST - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	43.4	TPM
GTEx:	39.4	RPKM
FANTOM5:	35.9	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	Low
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA022434		Antibody HPA022953		Antibody HPA022959		Antibody HPA028758		Antibody CAB007783
Adipocytes	Not detected		Not detected		Not detected		Not detected		High
Glandular cells	Low		Medium		Low		Not detected		High
Myoepithelial cells	Low		Medium		Not detected		Not detected		Not detected

BREAST - HPA RNA-seq

Average TPM	43.4

overview

Female, age 52

Sample 1
TPM: 32.7

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

overview

Female, age 80

Sample 2
TPM: 36.4

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

overview

Female, age 47

Sample 3
TPM: 63.5

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

overview

Female, age 38

Sample 4
TPM: 41.1

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	39.4

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 39.4

Samples: 214

Max RPKM: 550.2
Min RPKM: 10.1
Std RPKM: 58.6
Median RPKM: 25.0

GTEX-WY7C-2726-SM-3NB3P

50-59 years, male

550.2

GTEX-ZDXO-0126-SM-5S2ND

60-69 years, male

457.1

GTEX-X4XY-0926-SM-4E3JD

60-69 years, male

311.3

GTEX-U8XE-0826-SM-4E3J1

30-39 years, male

239.6

GTEX-ZDYS-1126-SM-5K7UB

50-59 years, male

211.4

GTEX-RUSQ-2026-SM-4GIAK

50-59 years, male

196.4

GTEX-T5JW-2026-SM-4DM63

20-29 years, female

149.0

GTEX-YB5K-1626-SM-5IFIN

40-49 years, female

139.2

GTEX-11TT1-2126-SM-5GU5Y

20-29 years, male

137.6

GTEX-117YX-1426-SM-5H12H

50-59 years, male

133.5

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	35.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 35.9

77 years, female

35.9

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.