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SUCLA2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:54.4TPM
GTEx:15.1RPKM
FANTOM5:31.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
Chondrocytes:Low
 
 
 

Antibody staining

Antibody HPA039435

  

Antibody HPA039536

  

Antibody HPA061528

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Medium   Low   Medium  

Peripheral nerve

 Low   High  

Chondrocytes

 Medium  
        
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Medium
 
 
 

Antibody staining

Antibody HPA039435

  

Antibody HPA039536

  

Antibody HPA061528

  

Adipocytes

 Medium   Not detected   Low  

Chondrocytes

 Medium   Medium  

Fibroblasts

 Not detected   Not detected   Medium  

Peripheral nerve

 Medium   Medium  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

54.4
N/A Female, age 80 Sample 1
TPM: 48.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 72.8
N/A Female, age 57 Sample 3
TPM: 62
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 46.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 41.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 15.1
Samples: 350

Max RPKM: 32.4
Min RPKM: 7.6
Std RPKM: 3.9
Median RPKM: 14.5
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 32.4
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 31.6
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 30.3
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 26.5
GTEX-ZVT2-2226-SM-5NQ6P 50-59 years, female 25.6
GTEX-SNMC-1326-SM-2XCFK 20-29 years, male 25.5
GTEX-U3ZN-2626-SM-3DB7T 30-39 years, female 25.0
GTEX-ZAK1-0226-SM-5CVMX 50-59 years, female 24.7
GTEX-ZT9X-1926-SM-57WE7 40-49 years, male 24.5
GTEX-S341-1626-SM-3K2B8 40-49 years, female 23.8
Show all
Adipose - Visceral (Omentum)
RPKM: 15.1
Samples: 227

Max RPKM: 36.6
Min RPKM: 6.4
Std RPKM: 4.8
Median RPKM: 14.1
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 36.6
GTEX-VUSG-1426-SM-3GIJN 50-59 years, male 33.9
GTEX-ZPU1-1226-SM-5HL71 40-49 years, male 31.0
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 27.7
GTEX-139YR-0326-SM-5J1MC 50-59 years, male 26.5
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 26.0
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 25.3
GTEX-XV7Q-1726-SM-4BRUU 40-49 years, female 25.3
GTEX-X3Y1-0926-SM-3P5YT 40-49 years, male 25.2
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 25.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

31.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 31.1
FF:10010-101C1 65,65,76 years, mixed 31.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.