Tissue expression of RAPGEF5 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	15.4	TPM
GTEx:	5.0	RPKM
FANTOM5:	33.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA057821
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	15.4

Female, age 70

Sample 1
TPM: 15.3

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 15.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 15.5

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	5.0

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 5.0

Samples: 286

Max RPKM: 11.7
Min RPKM: 2.1
Std RPKM: 1.8
Median RPKM: 4.6

GTEX-131XE-1426-SM-5HL7V

50-59 years, male

11.7

GTEX-Y111-1626-SM-57WCY

50-59 years, male

10.8

GTEX-X4EO-1226-SM-4QARR

60-69 years, female

10.7

GTEX-U3ZN-1726-SM-4DXUQ

30-39 years, female

10.3

GTEX-13PVQ-1726-SM-5IFF3

50-59 years, male

10.2

GTEX-12KS4-0926-SM-5BC5S

30-39 years, male

9.9

GTEX-ZF3C-1626-SM-4WWB4

50-59 years, female

9.9

GTEX-ZVE2-1326-SM-5NQ94

50-59 years, male

9.7

GTEX-13O1R-1326-SM-5IJF5

60-69 years, male

9.2

GTEX-RU72-0726-SM-46MUW

50-59 years, female

9.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	33.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 33.7

FF:10015-101C6

68,74,75 years, mixed

33.7