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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:44.5TPM
GTEx:16.3RPKM
FANTOM5:103.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA004856

  

Antibody CAB002499

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA004856

  

Antibody CAB002499

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

44.5
N/A Female, age 80 Sample 1
TPM: 28.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 45
N/A Female, age 57 Sample 3
TPM: 37.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 43.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 67.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 16.2
Samples: 350

Max RPKM: 36.6
Min RPKM: 8.6
Std RPKM: 4.1
Median RPKM: 15.4
GTEX-O5YT-0226-SM-32PK5 20-29 years, male 36.6
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 36.0
GTEX-R55F-1426-SM-2TF53 50-59 years, male 33.6
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 31.0
GTEX-S3XE-1626-SM-3K2AJ 50-59 years, male 27.7
GTEX-13S7M-0226-SM-5S2UG 60-69 years, female 27.0
GTEX-T2IS-0226-SM-32QPH 20-29 years, female 26.6
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 26.1
GTEX-145MI-0426-SM-5O99V 60-69 years, female 25.5
GTEX-Q2AH-1726-SM-3NB2B 40-49 years, male 25.5
Show all
Adipose - Visceral (Omentum)
RPKM: 16.5
Samples: 227

Max RPKM: 39.6
Min RPKM: 7.3
Std RPKM: 4.9
Median RPKM: 15.5
GTEX-11LCK-0326-SM-5A5M7 30-39 years, male 39.6
GTEX-12WSL-1126-SM-5CVNK 50-59 years, male 35.6
GTEX-13FHO-2026-SM-5J1OA 60-69 years, male 33.4
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 30.7
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 29.9
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 28.7
GTEX-ZLV1-0926-SM-5S2MR 60-69 years, female 27.7
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 27.1
GTEX-13PL7-1226-SM-5SIAR 60-69 years, female 26.2
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 26.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

103.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 103.1
FF:10010-101C1 65,65,76 years, mixed 103.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.