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PDPK1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.9TPM
GTEx:8.2RPKM
FANTOM5:22.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA035199

  

Antibody CAB004272

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

15.9
overview Male, age 54 Sample 1
TPM: 22
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 15.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.1
Samples: 149

Max RPKM: 10.1
Min RPKM: 3.6
Std RPKM: 1.2
Median RPKM: 7.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 10.1
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 10.0
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 9.9
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 9.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 9.2
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 9.2
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 9.2
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 9.1
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 9.0
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 9.0
Show all
Colon - Transverse
RPKM: 9.0
Samples: 196

Max RPKM: 14.9
Min RPKM: 5.1
Std RPKM: 1.9
Median RPKM: 9.0
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 14.9
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 14.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 13.7
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 13.4
GTEX-RM2N-0926-SM-48FD1 50-59 years, male 12.9
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 12.9
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 12.5
GTEX-R55G-1226-SM-48FDC 40-49 years, female 12.4
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 12.4
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 12.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.2
FF:10014-101C5 62,83,84 years, mixed 22.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.