Fields »
ABOUT
HELP
BLOG
CAMK4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.3TPM
GTEx:0.4RPKM
FANTOM5:11.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA011753

  

Antibody HPA017206

  

Antibody CAB004347

  

Endothelial cells

 Low   Not detected   Not detected  

Glandular cells

 Not detected   Not detected   High  

Peripheral nerve/ganglion

 Medium  
        
     
     
     

COLON - HPA RNA-seq

Average TPM

1.3
overview Male, age 54 Sample 1
TPM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 1.1
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 1.1
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 1.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 1.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.9
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 0.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 0.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 0.8
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 0.8
GTEX-12696-1926-SM-5EGJT 60-69 years, male 0.7
Show all
Colon - Transverse
RPKM: 0.5
Samples: 196

Max RPKM: 2.8
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 2.8
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 2.3
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 1.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 1.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 1.4
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 1.3
GTEX-11NSD-1626-SM-5986U 20-29 years, male 1.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 1.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 1.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 1.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.8
FF:10014-101C5 62,83,84 years, mixed 11.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.