Tissue expression of CLGN - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	0.6	TPM
GTEx:	0.7	RPKM
FANTOM5:	2.7	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA048761	Antibody HPA058627	Antibody CAB020709
Glandular cells	Medium	Not detected	Not detected

SMALL INTESTINE - HPA RNA-seq

Average TPM	0.6

Male, age 65

Sample 1
TPM: 0.6

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 0.3

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 0.7

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 0.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	0.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 0.7

Samples: 88

Max RPKM: 6.2
Min RPKM: 0.0
Std RPKM: 1.1
Median RPKM: 0.3

GTEX-111CU-1326-SM-5NQ8L

50-59 years, male

6.2

GTEX-WFG7-1726-SM-4LVME

20-29 years, male

5.6

GTEX-ZQUD-0926-SM-57WE3

30-39 years, male

4.4

GTEX-117YX-0326-SM-5GICL

50-59 years, male

4.1

GTEX-WEY5-1526-SM-4LMJF

40-49 years, female

3.3

GTEX-131XG-1726-SM-5LZUR

50-59 years, female

2.6

GTEX-ZP4G-1626-SM-57WGD

20-29 years, female

2.6

GTEX-12WSK-1526-SM-5CVNO

40-49 years, female

1.9

GTEX-1192X-2526-SM-59868

50-59 years, male

1.8

GTEX-Y114-1426-SM-4TT6W

50-59 years, female

1.6

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	2.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 2.7

FF:10024-101D6

15,40,85 years, mixed

2.7