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SPPL3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.1TPM
GTEx:11.8RPKM
FANTOM5:59.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA059958

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

27.1
overview Male, age 54 Sample 1
TPM: 20.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 23.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 24
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 33.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 30
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 24.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 38.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 32.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 24.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 11.5
Samples: 149

Max RPKM: 15.5
Min RPKM: 7.6
Std RPKM: 1.5
Median RPKM: 11.7
GTEX-12696-1926-SM-5EGJT 60-69 years, male 15.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 14.2
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 14.1
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 14.0
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 14.0
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 13.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 13.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 13.9
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 13.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 13.8
Show all
Colon - Transverse
RPKM: 12.1
Samples: 196

Max RPKM: 17.0
Min RPKM: 5.7
Std RPKM: 1.7
Median RPKM: 12.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 17.0
GTEX-11DXX-1826-SM-5H126 60-69 years, female 15.9
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 15.9
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 15.8
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 15.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 15.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 15.5
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 15.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 14.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 14.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

59.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 59.2
FF:10014-101C5 62,83,84 years, mixed 59.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.