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ITGA5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.7TPM
GTEx:173.3RPKM
FANTOM5:43.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002642

  

Antibody CAB009008

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

38.7
overview Male, age 54 Sample 1
TPM: 22.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 23.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 198.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 21.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 54.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 28.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 24.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 60.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

173.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 267.8
Samples: 149

Max RPKM: 1308.3
Min RPKM: 45.5
Std RPKM: 210.6
Median RPKM: 196.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 1308.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 1281.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 988.9
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 852.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 817.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 791.6
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 699.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 677.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 668.1
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 637.7
Show all
Colon - Transverse
RPKM: 101.5
Samples: 196

Max RPKM: 1185.3
Min RPKM: 5.2
Std RPKM: 149.2
Median RPKM: 53.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 1185.3
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 741.2
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 631.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 629.8
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 617.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 612.6
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 578.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 458.6
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 408.3
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 391.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

43.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 43.0
FF:10014-101C5 62,83,84 years, mixed 43.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.