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ABCE1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.1TPM
GTEx:7.9RPKM
FANTOM5:29.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB012476

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

22.1
overview Male, age 54 Sample 1
TPM: 17.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 24.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 26.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 25.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 29
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 24.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.7
Samples: 149

Max RPKM: 21.8
Min RPKM: 2.9
Std RPKM: 2.8
Median RPKM: 7.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 21.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 15.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 15.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 14.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 14.0
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 13.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 13.2
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 13.1
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 12.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 12.0
Show all
Colon - Transverse
RPKM: 8.1
Samples: 196

Max RPKM: 20.5
Min RPKM: 1.6
Std RPKM: 2.7
Median RPKM: 7.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 20.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 18.9
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 17.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 15.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 14.7
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 13.8
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 13.6
GTEX-144GN-1126-SM-5LU33 50-59 years, male 13.2
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 13.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 13.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

29.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 29.7
FF:10014-101C5 62,83,84 years, mixed 29.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.