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SNAPC4

COLON - Expression summary

RNA expression
HPA:2.3TPM
GTEx:5.1RPKM

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA046627

  

Endothelial cells

 High  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.0
Samples: 149

Max RPKM: 8.8
Min RPKM: 2.1
Std RPKM: 1.2
Median RPKM: 4.9
GTEX-V955-1726-SM-4JBHF 60-69 years, male 8.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 8.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 8.2
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 8.1
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 7.9
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 7.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 7.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 7.4
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 7.2
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 7.2
Show all
Colon - Transverse
RPKM: 5.2
Samples: 196

Max RPKM: 7.8
Min RPKM: 2.9
Std RPKM: 1.0
Median RPKM: 5.1
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 7.8
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.7
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 7.7
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 7.5
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 7.5
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 7.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 7.2
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 7.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 7.0
Show all

COLON - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.