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BMI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:26.3TPM
GTEx:2.5RPKM
FANTOM5:39.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA030472

  

Antibody CAB011120

  

Endothelial cells

 Low   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

26.3
overview Male, age 54 Sample 1
TPM: 19.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 38
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 30.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 18.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 42.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 27.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 27.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 30.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.9
Samples: 149

Max RPKM: 7.5
Min RPKM: 0.6
Std RPKM: 1.3
Median RPKM: 2.7
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 7.5
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 6.5
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 5.6
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 5.6
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 5.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 5.3
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 5.3
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 5.2
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 5.2
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 5.1
Show all
Colon - Transverse
RPKM: 2.1
Samples: 196

Max RPKM: 6.7
Min RPKM: 0.2
Std RPKM: 1.2
Median RPKM: 1.7
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 6.7
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 6.0
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 5.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 5.5
GTEX-117YX-0826-SM-5H11J 50-59 years, male 5.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 5.4
GTEX-11NSD-1626-SM-5986U 20-29 years, male 5.0
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 4.8
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 4.6
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 4.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.5
FF:10014-101C5 62,83,84 years, mixed 39.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.