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PGAM1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:140.3TPM
GTEx:30.8RPKM
FANTOM5:20.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA042528

  

Antibody HPA049237

  

Endothelial cells

 Low   Medium  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Low   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

140.3
overview Male, age 54 Sample 1
TPM: 143.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 110.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 113.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 147.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 116
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 203.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 167
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 122.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 155.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 144.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 166.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 141.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 93.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

30.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 32.0
Samples: 149

Max RPKM: 51.4
Min RPKM: 18.2
Std RPKM: 6.0
Median RPKM: 31.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 51.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 51.3
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 48.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 47.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 46.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 46.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 45.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 44.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 43.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 42.4
Show all
Colon - Transverse
RPKM: 29.9
Samples: 196

Max RPKM: 50.8
Min RPKM: 14.5
Std RPKM: 6.6
Median RPKM: 29.1
GTEX-1128S-1626-SM-5H12O 60-69 years, female 50.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 50.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 48.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 47.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 47.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 46.8
GTEX-144GN-1126-SM-5LU33 50-59 years, male 43.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 42.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 42.2
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 42.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

20.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 20.4
FF:10014-101C5 62,83,84 years, mixed 20.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.