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HIC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.8TPM
GTEx:5.3RPKM
FANTOM5:39.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA043372

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

3.8
overview Male, age 54 Sample 1
TPM: 4.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.5
Samples: 149

Max RPKM: 19.9
Min RPKM: 1.6
Std RPKM: 3.7
Median RPKM: 5.2
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 19.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 19.3
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 19.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 17.6
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 15.9
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 15.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 13.9
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 13.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 13.6
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 13.3
Show all
Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 23.7
Min RPKM: 0.5
Std RPKM: 3.4
Median RPKM: 3.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 23.7
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 20.6
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 17.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 15.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 14.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 14.0
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 13.1
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 12.9
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 12.0
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 11.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.3
FF:10014-101C5 62,83,84 years, mixed 39.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.