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ARID5A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:3.9TPM
GTEx:21.2RPKM
FANTOM5:33.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
 

Antibody staining

Antibody HPA023879

  

Endothelial cells

 Medium  

Glandular cells

 Low  
 

COLON - HPA RNA-seq

Average TPM

3.9
overview Male, age 54 Sample 1
TPM: 3.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 7.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

21.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 26.4
Samples: 149

Max RPKM: 140.6
Min RPKM: 5.1
Std RPKM: 22.0
Median RPKM: 17.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 140.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 114.0
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 96.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 83.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 73.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 72.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 71.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 71.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 71.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 70.8
Show all
Colon - Transverse
RPKM: 17.4
Samples: 196

Max RPKM: 226.4
Min RPKM: 2.5
Std RPKM: 22.1
Median RPKM: 9.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 226.4
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 105.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 100.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 85.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 82.6
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 55.7
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 51.8
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 50.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 48.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 47.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

33.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 33.9
FF:10014-101C5 62,83,84 years, mixed 33.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.