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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.0TPM
GTEx:6.1RPKM
FANTOM5:14.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Not detected
 

Antibody staining

Antibody HPA001231

  

Antibody CAB004492

  

Squamous epithelial cells

 Not detected   Not detected  
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

13.0
overview Female, age 70 Sample 1
TPM: 14.8
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 15.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 8.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 6.1
Samples: 286

Max RPKM: 28.5
Min RPKM: 1.2
Std RPKM: 4.5
Median RPKM: 4.7
GTEX-ZA64-0626-SM-5HL9O 20-29 years, male 28.5
GTEX-11EM3-0826-SM-5N9CC 20-29 years, female 22.6
GTEX-13CF3-1626-SM-5IFG9 60-69 years, female 22.4
GTEX-13X6H-1326-SM-5LU42 50-59 years, female 21.9
GTEX-ZT9X-0526-SM-5GCOP 40-49 years, male 20.8
GTEX-ZAB5-0926-SM-5CVMV 50-59 years, male 19.6
GTEX-WOFM-0626-SM-4OOS3 20-29 years, male 19.2
GTEX-XV7Q-1126-SM-4BRVS 40-49 years, female 19.1
GTEX-R55D-1126-SM-48FEB 50-59 years, male 18.9
GTEX-U3ZN-1726-SM-4DXUQ 30-39 years, female 18.4
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

14.9

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 14.9
FF:10015-101C6 68,74,75 years, mixed 14.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.