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SMALL INTESTINE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:42.7TPM
GTEx:15.9RPKM
FANTOM5:74.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA001231

  

Antibody CAB004492

  

Glandular cells

 Not detected   Medium  
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

42.7
overview Male, age 65 Sample 1
TPM: 42.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 31.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 47.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 49.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

15.9

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 15.9
Samples: 88

Max RPKM: 46.7
Min RPKM: 2.5
Std RPKM: 8.9
Median RPKM: 13.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 46.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 37.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 37.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 32.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 32.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 32.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 30.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 29.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 29.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 29.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

74.5

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 74.5
FF:10024-101D6 15,40,85 years, mixed 74.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.