Tissue expression of COMMD3-BMI1 - Summary - The Human Protein Atlas

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COMMD3-BMI1

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	COMMD3-BMI1
Gene description	COMMD3-BMI1 readthrough
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (testis)
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Expression in a few tissues, including testis.

DATA RELIABILITY
Data reliability description	Pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.
Reliability score	Uncertain based on 2 antibodies. HPA030472 , HPA036584
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	COMMD3-BMI1
Synonyms
Description	COMMD3-BMI1 readthrough (HGNC Symbol)
Entrez gene summary	This locus represents naturally occurring read-through transcription between the neighboring COMM domain-containing protein 3 and polycomb complex protein BMI-1 genes on chromosome 10. The read-through transcript produces a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Feb 2011]
Chromosome	10
Cytoband	p12.2
Chromosome location (bp)	22316388 - 22329542
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000269897 (version 83.38)
Entrez gene	100532731
UniProt
neXtProt
Antibodypedia	COMMD3-BMI1 antibodies

PROTEIN BROWSER

COMMD3-BMI1-001	COMMD3-BMI1-004	COMMD3-BMI1-005

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
COMMD3-BMI1-001 ENSP00000473391 ENST00000602390	R4GMX3 [Direct mapping] Protein COMMD3-BMI1 Show all	THUMBUP predicted membrane proteins Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0008270 [zinc ion binding] GO:0046872 [metal ion binding] Show all	469 aa 53.3 kDa	No	0
COMMD3-BMI1-004 ENSP00000473382 ENST00000475460	R4GMW6 [Direct mapping] Protein COMMD3-BMI1 Show all	Predicted intracellular proteins Show all		159 aa 18.1 kDa	No	0
COMMD3-BMI1-005 ENSP00000473495 ENST00000489125	R4GN54 [Direct mapping] Protein COMMD3-BMI1 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all		110 aa 12.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.