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GORASP2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.0TPM
GTEx:20.4RPKM
FANTOM5:78.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035274

  

Antibody HPA035275

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   

COLON - HPA RNA-seq

Average TPM

18.0
overview Male, age 54 Sample 1
TPM: 25.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 22.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 20.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.2
Samples: 149

Max RPKM: 31.1
Min RPKM: 11.1
Std RPKM: 3.4
Median RPKM: 19.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 31.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 28.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 27.4
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 25.2
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 25.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 24.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 24.6
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 24.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 24.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 24.2
Show all
Colon - Transverse
RPKM: 21.2
Samples: 196

Max RPKM: 35.7
Min RPKM: 10.7
Std RPKM: 3.6
Median RPKM: 21.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 35.7
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 31.6
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 30.4
GTEX-144GM-1226-SM-5LU52 20-29 years, male 30.0
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 29.9
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 29.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 29.4
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 28.5
GTEX-QMRM-1226-SM-447C6 50-59 years, male 28.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 28.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

78.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 78.1
FF:10014-101C5 62,83,84 years, mixed 78.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.