Fields »
ABOUT
HELP
BLOG
ALB

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.3TPM
GTEx:2.5RPKM
FANTOM5:0.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:High
Fibroblasts:Not detected
Peripheral nerve:Not available
Adipocytes:Not detected
 

Antibody staining

Antibody HPA031024

  

Antibody HPA031025

  

Antibody CAB006262

  

Chondrocytes

 Low   High  

Fibroblasts

 Medium   Not detected   Medium  

Peripheral nerve

 Not detected   Not detected  

Adipocytes

 Not detected   Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA031024

  

Antibody HPA031025

  

Antibody CAB006262

  

Adipocytes

 Medium   Medium   Not detected  

Fibroblasts

 Medium   Not detected   Low  

Peripheral nerve

 Medium   Low   Not detected  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

6.3
N/A Female, age 80 Sample 1
TPM: 10.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 4
N/A Female, age 57 Sample 3
TPM: 15.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 0.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 0.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 0.7
Samples: 350

Max RPKM: 16.7
Min RPKM: 0.0
Std RPKM: 1.2
Median RPKM: 0.4
GTEX-ZDXO-2426-SM-5S2NJ 60-69 years, male 16.7
GTEX-Z9EW-1826-SM-5CVMA 40-49 years, male 10.4
GTEX-1399R-2626-SM-5KLZ7 30-39 years, male 5.3
GTEX-13CF3-2326-SM-5IFGL 60-69 years, female 4.5
GTEX-YJ89-0226-SM-4TT3Y 60-69 years, male 4.3
GTEX-11UD1-0226-SM-5EQKL 40-49 years, female 3.8
GTEX-11PRG-0626-SM-5BC56 50-59 years, male 3.7
GTEX-139T6-2126-SM-5KM37 50-59 years, male 3.4
GTEX-1399T-2726-SM-5K7XK 60-69 years, male 3.0
GTEX-T5JC-0526-SM-32PM7 20-29 years, male 3.0
Show all
Adipose - Visceral (Omentum)
RPKM: 5.2
Samples: 227

Max RPKM: 765.6
Min RPKM: 0.0
Std RPKM: 50.7
Median RPKM: 0.6
GTEX-WY7C-0926-SM-3NB34 50-59 years, male 765.6
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 50.8
GTEX-ZV7C-0826-SM-59HK8 50-59 years, male 23.7
GTEX-13OVL-0826-SM-5L3GV 50-59 years, male 23.1
GTEX-13OW8-0326-SM-5L3FB 60-69 years, male 17.1
GTEX-145LU-1226-SM-5LU9B 50-59 years, male 16.0
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 14.2
GTEX-11OF3-0826-SM-5BC51 60-69 years, male 13.0
GTEX-ZDTS-1826-SM-5S2N6 60-69 years, male 11.6
GTEX-146FR-0226-SM-5Q5F6 60-69 years, female 8.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

0.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 0.7
FF:10010-101C1 65,65,76 years, mixed 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.